Publications
- H. Karimabadi, H.X. Vu, Y. Omelchnko, B. Loring, M. Tatineni, A. Majumdar, U. V. Catalyurek, E. Saule, “Enabling Breakthrough Kinetic Simulations of the Magnetoshpere via Multi-zone Petascale Computing, “ TeraGrid 09 Conference, Washington D.C., June 22-26, 2009.
- Lennox Hoyte, Margot S. Damaser, Simon K. Warfield, Giridhar Chukkapalli,
Amitava Majumdar, Dong Ju Choi, Abhishek Trivedi, and Petr Krysl, "Quantity and
Distribution of Levator Ani Stretch during Vaginal Childbirth," American Journal of Obstetrics
and Gynecology, Volume 199, Issue 2, August 2008.
- Lennox Hoyte, Margot S. Damaser, Simon K. Warfield, Giridhar Chukkapalli,
Amitava Majumdar, Dong Ju Choi, Abhishek Trivedi, and Petr Krysl, "Quantity and
Distribution of Levator Ani Stretch during Vaginal Childbirth," South Atlantic
Association of Obstetricians and Gynecologists 70th Conference, January 20-23,
2008, Sarasota, Florida.
- Steve B. Jiang, H. Edwin Romeijn, Chunhua Men, Neelam Tyagi, Lily Tang, Dong Ju Choi, Amitava Majumdar, Todd Pawlicki, Catheryn Yashar, Arno J. Mundt, "Towards On-line Adaptive Radiotherapy for Cervical Cancer,"
Mathematical Methods in Biomedical Imaging and Intensity-Modulated Radiation Therapy (IMRT), Publications
of the Scuola Normale Superiore, CRM Series, Vol 7. Censor, Yar, Jiang, Ming, Louis, Alfred K. (Eds). 2008, XX. 526 p.
- Y. Cui, R. Moore, K. Olsen, A. Chourasia, P. Maechling, B. Minster, S. Day, Y. Hu, J. Zhu, A. Majumdar
T. Jordan, "Enabling Very-Large Earthquake Simulations on Parallel Machines," International Conference
on Computational Science , Beijing, China, May 27-30, 2007; Lecture Notes in Computer Science, Part 1, series 4487, pp 46-53, Springer, 2007.
- S.P. DiMaio, N. Archip, N. Hata, I.F. Talos, S.K. Warfield, A. Majumdar, N. McDannold,K. Hynynen,
P.R. Morrison, W.M. Wells III, D.F.Kacher, R. E. Ellis, A.J.Golby, P.M.Black, F.A. Jolesz, and R. Kikinis, ``Image-Guided Neurosurg
ery at Brigham and Women's Hospital: The integration of imaging, navigation
and interventional devices,'' IEEE Engineering in Medicine and Biology , Vol. 25, Issue 5, pp 67-73, 2006.
- T. Devadithya, A. Birnbaum, A. Majumdar, D. Choi, R. Wolski, K. Baldridge, N. Archip,
and S. K. Warfield, "On-demand High Performance Computing: Image Guided neuro-Surgery
Feasibilty Study", 12th International Conference on Parallel and Distributed Systems,
Minneapolis, MN, July 12-15, 2006.
- L. Hoyte, P. Krysl, G. Chukkapalli, A. Majumdar, D. Choi, A. Trivedi, S. K. Warfield, M.
Damaser, ``Computational Model of Levator Ani
Muscle Stretch During Vaginal Delivery," 5th World Congress of Biomechanics , Munich, Germany, July, 2006.
- A. Majumdar, S.K. Warfield, P. Krysl, D. Choi, N. Archip, K. Baldridge, ``Dynamic Data Driven Finite Element Modelling of
Brain Shape Deformation During Neurosurgery", 12th SIAM Conference on Parallel Processing for Scientific
Computation, Feb. 22-24, 2006, San Francisco.
- A. Majumdar, A. Birnbaum, D. Choi, A. Trivedi, S. K. Warfield, K.
Baldridge, and P. Krysl, ``A Dynamic Data Driven Grid System for
Intra-operative Image Guided Neurosurgery,'' International Conf. On
Computational Science, May 2005, Atlanta, GA, V. S. Sunderam et al (Eds),
Springer-Verlag Berlin Heidelberg : ICCS 2005, LNCS 3515, pp. 672-679,
2005.
- Y. Dewaraja, M. Ljungberg, A. Majumdar, A. Bose, and K. F. Koral,``A Parallel Monte Carlo
Code for Planar and SPECT Imaging: Implementation, Verification and Applications
in I-131 SPECT,'' Journal of Computer Methods and Programs in Biomedicine,
Volume 67, Issue 2 (2002), pp. 115 - 124
- Y. Dewaraja, M. Ljungberg, A. Majumdar, A. Bose, and K. F. Koral, "A Parallel Monte Carlo Code for Planar and SPECT Imaging:
Implementation, Verification and Applications in I-131 SPECT,'' IEEE Nuclear
Science Symposium and Medical Imaging Conference, Lyon, France, October 15-20,
2000.
- A. Majumdar, and W. R. Martin, "Per
formance Measurement of Monte Carlo Photon Transport on Parallel Machines,''Proceeding
s International Topical Meeting on Advances in Reactor Physics and
Mathematics and Computation into the Next Millennium, Philadelphia, May 7-11, 2000.
- A. Majumdar, "Parallel Performance Study of Monte Carlo Photon Transport Code on Shared-,
Distributed, and Distributed-Shared-Memory Architectures,'' Proceedings International Parallel & Distributed Processing Symposium 2000, Cancun, Mexico, May 1-5, 2000.
- A. Snavely, L. Carter, J. Boisseau, A. Majumdar, K. S. Gatlin, N. Mitchell,
J. Feo, and B. Koblenz,
``Multi-processor Performance on the Tera MTA,''Proceedings Supercomputing 98, Orlando, Florida.
- J. Boisseau, L. Carter, K.S. Gatlin, A. Majumdar and A. Snavely,
``NAS Benchmarks on the Tera MTA,''
Workshop on Multi-Threaded Execution, Architecture and Compilation (M-TEAC 98), February 1998.
- A. Majumdar and W. R. Martin (invited paper)
``Development of a Multiple Perturbation
Monte Carlo Methods for Criticality Problems and Implementation on Parallel
Processors,'' Joint Nuclear Conferences X ENFIR/III ENAN, Auguas de Lindola,
Brazil, August 7 - 11, 1995.
- A. Majumdar and W. R. Martin `
`Multiple Reactivity Calculation Using Single
Correlated Sampling Monte Carlo Simulation,'' Proceedings
International Conference on Mathematics and Computations, Reactor Physics and
Environmental Analyses, Portland, Oregon, April 30 - May 4, 1995, Vol. 1, p. 85 (1995).
- A. Majumdar and W.R. Martin, ``Calculation of Reactivity Perturbations
Using Correlated Sampling Monte Carlo,'' Transaction American
Nuclear Society, 71, 203 (1994).
- A. Majumdar and D. Majumdar,
``Possible Locations of Monitored
Retrievable Storage from a Spent-Fuel Transportation Perspective,'' Transaction
American Nuclear Society, 70, 61 (1994).
- W.R. Martin, A. Majumdar, J.A. Rathkopf and M. Litvin, ``Experiences
with Different Parallel Programming Paradigms for Monte Carlo Particle
Transport Leads to a Portable Toolkit for Parallel Monte Carlo,'' Proceedings
International Joint
Conference on Mathematical Methods and Supercomputing in Nuclear
Applications, Karlsruhe, Germany, April 19-23, 1993, Vol. II, p. 418 (1993).
- A. Majumdar and W.R. Martin, ``Parallel Preconditioned Conjugate
Gradient Algorithm Applied to Neutron Diffusion Problem,'' Transaction
American Nuclear Society, 65, 209 (1992).
- A. Majumdar and H. Makowitz, ``Study of Algorithms to Enhance Vector
Performance of Thermal-Hydraulic Codes Based on a Hopscotch Scheme,''
Transaction American Nuclear Society, 55, 331 (1987).
Talks/Posters
- A. Majumdar (invited talk), "High Performance Computational Science - Teraflop to Petaflop," High Performance Computing and Simulation Symposium (HPC 2009), 2009 Spring Simulation Multiconference (SpringSim'09), March 22-27, 2009, San Diego, CA.
- A. Majumdar (panel), "Dynamic Data Driven Application Systems - New Drivers for Networking
and Communications," IEEE GLOBECOM 2007, Nov. 26 - 30, 2007, Washington, DC.
- A. Majumdar (panel), "HPC at Major Universities," HPC User Forum, Sept. 25-27, 2007, Santa Fe, New Mexico.
-
A. Majumdar (invited talk), "Computational Science : TeraFlop to PetaFlop," Kobe University, Japan, Sept 5, 2007.
- A. Majumdar, A. Birnbaum, T. Devadithya, J. Andrews, K. Bladridge, D.
Choi, S. Warfield, N. Archip, "Grid Enabled Image Guided Neurosurgery
Using High Performance Computing," Fifth Virtual Conference on Genomics
and Bioinformatics, Oct. 25-28, 2005.
- A. Majumdar, Simon K. Warfield, Florin Talos, Ron Kikinis, Ferenc A.
Jolesz, Adam Birnbaum, Dong Ju Choi, and Kim Baldrideg, Grid Enabled High
Performance Computing for Image Guided Therapy, 5th Interventional MRI
Symposium, Boston, MA, Oct 15-16, 2004.
- Berkeley, IBM SP SciComp6, August 19-23, 2002: ``Parallel Medical and Genomics Applications on Power3 and Power4 Machines''.
- San Diego, American Chemical Society National Meeting, April 1-5, 2001:``Mapping of Parallel Monte Carlo and Fast Multipole Algorithms on Parallel
Machines''.
- Hitachi Research Lab, Hitachi, Japan, December 28, 1999:``Parallelization and Performance Issues of a Monte
Carlo Photon Transport Code''.
- IBM T. J. Watson Research Center, New York, October 7, 1999 :``Parallelization and Performance Issues of a Monte
Carlo Photon Transport Code on Nighthawk and
other machines ''
- University of Michigan, Nuclear Engineering Department, April, 1995:
``Calculation of Reactivity Perturbations Using Monte Carlo Methods.''
- Argonne National Laboratory, Reactor Engineering and Reactor Analysis
Department Joint Seminar, December, 1995: ``Monte Carlo Perturbation
Methods and Implementation on Parallel Computers.''
- Texas A&M University, Nuclear Engineering Department, April, 1996:
``Development of a Multiple Perturbation Monte Carlo Method for Eigenvalue
Problems and Impelmentaion on Parallel Processors.''(with W. R. Martin)
- University of Houston, Center for Parallel Computing, April, 1996:
``Development of a Multiple Perturbation Monte Carlo Method for Eigenvalue
Problems and Impelmentaion on Parallel Processors.''(with W. R. Martin)
- Bettis Atomic Power Lab., Pittsburg, April, 1995: ``Development of a
Multiple Perturbation Monte Carlo Method for Criticality Problems and
Impelmentaion on Parallel Processors.'' (with W. R. Martin)
- Center d'Etudes, Saclay, France, April 1993: ``Experiences with
Different Parallel Programming Paradigms for Monte Carlo Particle
Transport Leqads to a Portable Toolkit for Parallel Monte
Carlo.'' (with W. R. Martin, J. A. Rathkopf and M. Litvin)
Reports
- A. Birnbaum, A. Majumdar, T. Devadithya, D. Choi, R. Wolski, K. Baldridge,``On-demand High Performance
Computing : Image Guided Neuro Surgery Feasibility Study," SDSC Technical Report, SDSC-TR-2006-2, 2006.
- `` Evaluation of a Multithreaded Architecture for Defense Applications'',
W. Pfeiffer, L. Carter, A. Snavely, R. Leary, A. Majumdar, (SDSC, UC San Diego),
S. Brunett (Cal. Tech), J. Feo, B. Koblenz, L. G. Stern (Tera Computer),
J. W. Manke (Boeing), T. P. Boggess (Sanders/Lockheed Martin), Final Report
to DARPA, September 1999, SDSC TR-1999-1.
- ``The Slightly-Enriched Spectral Shift Control Reactor,'' Final report to Department of
Energy
for the Project September 30, 1988 - September 30, 1991, DOE/ER/12809-4.