{1. InterPro as a source of protein domain and family information.}
{2. Look up protein domain information in ProDom.}
{3. Look up protein fingerprint information in PRINTS.}
{4. Look up protein family information using the Pfam database.}
{5. Find out about your protein family/superfamily via the PIR/MIPS FamBase.}
{6. Find out about your protein family/superfamily via the Stanford eMotif site.}
{B. PROSITE signature database.}
{1. Learn about PROSITE and how signatures are made by reading the user manual.}
{2. Check to see if your sequences contain known PROSITE signatures.}
{3. Use the GCG program MOTIFS to search your sequence for motifs.}
{C. Weight matrix patterns }
{1. Weight your sequences using the WEIGHT program.}
{2. Create a profile from a group of aligned sequences. }
{3. Search against database using PROFILESEARCH }
{4. Compare results to BLAST search with some of the single sequences. }
{5. Use MEME server to learn motifs. }
{D. Questions.}