|The RCSB Protein Data Bank (PDB)||
The single worldwide source of primary structural data on biological macromolecules determined experimentally. Developed in collaboration with Rutgers University our partner in the Research Collaboratory for Structural Bioinformatics (RCSB).
|Functional Site Classification (SMAP)||
Software and associated documentation for finding comparable ligand binding sites.
|Domain Assignment (PDomains)||
The main goal of this resource is to better understand principles behind structural domains identified from 3D coordinates ref .
|Structure Comparison Database (CE)||
Pair-wise structure comparisons based on the Combinatorial Extension (CE).
Compilation of recurring protein substructures.
|Extended GO Annotation of PDB Chains||
Use of structure comparison to extend the coverage of GO terms in the PDB.
|Protein DNA Complexes||Automated classification of protein-DNA complexes of known structure.|
|Multiple Structure Alignment CE-MC||
Starting from CE pair wise alignments a multi-structure alignment is computed using a Monte Carlo optimization technique (hosted in Rome).
Graphical comparison of contact maps.
|Kinase Alignments||Hand curated protein kinase-like superfamily structure alignments.|
|Immune Epitope Database (IEDB)||Information that facilitates the dissemination of immune epitope information, the generation of new research tools, diagnostic techniques, vaccines and therapeutics for emerging and re-emerging diseases.|