PLUTO Documentation

  1. Introduction
  2. Running PLUTO
  3. Atom and molecule selection
    1. Base residues
    2. Atom selection
    3. Packing diagrams
    4. Packing slices
    5. Network expansion
    6. Editing the molecule list
  4. Geometric objects and measurements
  5. Hydrogen atom positions
  6. Bond type assignments
  7. Intermolecular contacts and hydrogen bonds
    1. Intermolecular contacts
    2. Hydrogen bonds
    3. Graph Sets
  8. Intermolecular interaction energies
  9. Rendering options
    1. Plot styles
    2. Plot view
    3. Labelling and annotation
    4. Colour modes
  10. Input and Output options
    1. Crystallographic input
    2. Graphical output
    3. Crystallographic output
  11. File formats
    1. FDAT format specification
    2. COOR format specification
    3. Free format specification
  12. Graphics configuration options